| | New binding site in catalase? (Site not responding. Last check: 2007-11-03) |
 | | During an all-against-all comparison of a database of protein domains, we found a significant similarity between a domain in catalase and the structures of calycins, a group of proteins having no sequence similarity, but which adopt a common up-down-up-down, anti-parallel beta barrel structure. |
 | | Catalase appears to have a similar, though partially covered pocket. |
 | | The pocket in catalase has a volume (as calculated by Insight) of approximately 115 angstroms, the cavity in avidin has a volume of approximately 224 angstroms, the larger size being explained mostly by the fact that the cavity in avidin is open to solvent on one side. |
| bonsai.lif.icnet.uk /people/rob/catalase.html (220 words) |