| | Molecular Surfaces: Electron Density Fitting |
 | | The main problem in electron density fitting is that moving two different, but connected parts of the molecule into their appropriate electron density may cause these two parts not to join properly (e.g. |
 | | The model and density are made to appear three dimensional by various methods: stereo pairs, rotation interactively controlled by analog input device, and intensity depth cueing. |
 | | Atoms are positioned into the density by (1) moving entired residues, (2) rotating around torsional angles, (3) regularizing using a method developed by Jan Hermans and John McQueen, (4) the MOVE command, which moves an atom to where on wants it. |
| www.netsci.org /Science/Compchem/feature14c.html (1513 words) |