| |
| | Measuring the Landscape (Site not responding. Last check: 2007-10-12) |
 | | We can estimate, for each instance of the phylogeny problem, the number and distribution of local optima, the size of the domain of attraction of each local optimum we find, the distribution of values of the optimality criterion (c.f. |
 | | In the "ideal" case, we have just one optimum which is therefore globally optimal, or a few local optima which are very close to each other in the space. |
 | | When there are many local optima, spread far apart in the space, that means that in terms of the tree adjacency rules (tree perturbations) we have chosen, the optimal trees are not similar. |
| taxonomy.zoology.gla.ac.uk /~mac/landscape/measuring.html (777 words) |
|