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| | BioMed Central | Full text | Exploring photosynthesis evolution by comparative analysis of metabolic networks between ... |
 | | The average clustering coefficients, the average path lengths and the diameters of both enzyme and compound nodes (Table 1) confirmed that the metabolic networks under study are scale-free and small-world networks using hypergraph model. |
 | | The function of each enzyme module in chloroplast and photosynthetic bacteria was classified using the classification scheme proposed in KEGG which includes nine major pathways: carbohydrate metabolism, energy metabolism, lipid metabolism, nucleotide metabolism, amino-acid metabolism, glycan biosynthesis and metabolism, metabolism of cofactors and vitamins, biosynthesis of secondary metabolites, and biodegradation of xenobiotics. |
 | | Moreover five pairs of these modules are very conserved among chloroplasts and photosynthetic bacteria: three pairs correspond to amino-acid metabolism, two pairs belong to carbohydrate metabolism and nucleotide metabolism respectively, all of which are related to the core metabolism. |
| www.biomedcentral.com /1471-2164/7/100 (6032 words) |
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