Where results make sense

About us   |   Why use us?   |   Reviews   |   PR   |   Contact us

Topic: Phylogenetics software

    Note: these results are not from the primary (high quality) database.

Ads by Google

In the News (Fri 1 Jan 10)

Northern Trust

Marvin Harrison

Peter Chernin

Gary Locke

Match Play

Penelope Cruz

Mickey Rourke

AR Rahman

Danny Boyle

Hugh Jackman

Phylogeny Programs Their listing has links to the web sites of the software; for those programs that are not available by Web they maintain copies for download at their server. The Community Software list at the CIPRes (CyberInfrastructure for Phylogenetic Research) project lists phylogeny programs produced by its members with a one-line description for each. They have a reasonably large number of entries under that heading, though it also includes some statistical genetics software that is really not phylogenetic. evolution.genetics.washington.edu /phylip/software.html   (1760 words)

Oxford Evolutionary Biology - Evolution, Molecular Phylogenetics & Epidemiology, Molecular Evolution Software Oxford Evolutionary Biology - Evolution, Molecular Phylogenetics and Epidemiology, Molecular Evolution Software This is a site for various projects in evolutionary biology, molecular evolution and phylogenetic epidemiology being carried out by members of the research group headed by Paul Harvey in the Department of Zoology at the University of Oxford. Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences evolve.zoo.ox.ac.uk   (280 words)

Phylogenetics & Comparative Genomics This course will provide a practical, hands-on introduction to the study of phylogenetics and computational genomics. Links to required software used in the course Theoretical background on molecular evolution will be provided only as needed to inform the comparative analysis of genomic data. jhunix.hcf.jhu.edu /~kjordan6   (220 words)

Phylogenetics Software Resources Documentation is provided with the software but may also be viewed on the WWW, courtesy of the Institute of Biochemistry and Biophysics of the Polish Academy of Sciences. Free software for managing and editing molecular data sets, made available by TIGR (The Institute for Genomic Research). Extensive and well organized list of software sources and providers, found at Taxonomy and Systematics at Glasgow. www.ucmp.berkeley.edu /subway/phylo/phylosoft.html   (465 words)

Biology 402 - Molecular Systematics - WWW Links Jump to Links for Molecular Biology Searches, Sequence Alignment, Ribosomal RNA, Protein Structure, Mitochondrial and Chloroplast Genomes, Primer Design, Restriction Enzymes, Transposons, Genomics, Evo-Devo, Phylogenetics, Macintosh Software Archives, Molecular Systematics Journals, Bioinformatics and Biocomputing, Evolutionary Biology Resources, Commercial Biotech Sites Jump Back to Links for Molecular Biology Searches, Sequence Alignment, Ribosomal RNA, Protein Structure, Mitochondrial and Chloroplast Genomes, Primer Design, Restriction Enzymes, Transposons, Genomics, Evo-Devo, Phylogenetics, Macintosh Software Archives, Molecular Systematics Journals, Bioinformatics and Biocomputing, Evolutionary Biology Resources, Commercial Biotech Sites San Diego Supercomputer Center (CMS) Molecular Biology Resources biology.fullerton.edu /biol402/molbio.html   (547 words)

BIOLC337 Molecular Evolution A computer-based bioinformatics practical offer the students opportunities to get familar with software used in molecular phylogenetics. This course will`cover major areas of molecular evolution and phylogenetics. Objectives: Molecular evolution is a young and exciting field and combines advancements in molecular biology and computer technology. abacus.gene.ucl.ac.uk /C337   (238 words)

The PAL Project The PAL project (http://www.pal-project.org) is a collaborative effort dedicated to provide a high quality Java library for use in molecular evolution and phylogenetics. The PAL project is a collaborative effort to provide a high quality Java library for use in molecular evolution and phylogenetics. We also thank Allen Rodrigo for providing hardware through his NIH grant #59174 and Don Gilbert for distributing PAL in his software archive. ftp.cse.sc.edu /bioinformatics/PAL/pal-1.4/doc   (1452 words)

Oxford Evolutionary Biology - Evolution, Molecular Phylogenetics & Epidemiology, Molecular Evolution Software Oxford Evolutionary Biology - Evolution, Molecular Phylogenetics and Epidemiology, Molecular Evolution Software This is a site for various projects in evolutionary biology, molecular evolution and phylogenetic epidemiology being carried out by members of the research group headed by Paul Harvey in the Department of Zoology at the University of Oxford. Bayesian Evolutionary Analysis Sampling Trees - a Bayesian MCMC for phylogenetic analyses of molecular sequences. evolve.zoo.ox.ac.uk   (291 words)

Julian Humphries' Home Page As part of his training he is a systematic ichthyologist with interests in the relationships of North American freshwater fishes, phylogenetic methodology and the use of morphometrics characters in phylogenetics. He has been active for the past eight years designing, coding and distributing data management software for the biological collections community. However, much of his time is spent on understanding and developing the relationships among information modelling, data synthesis and presentation, collections data and systematics (particularly taxonomy). biodiversity.uno.edu /julian   (291 words)

Oxford Evolutionary Biology - Evolution, Molecular Phylogenetics & Epidemiology, Molecular Evolution Software This is a site for various projects in evolutionary biology, molecular evolution and phylogenetic epidemiology being carried out by members of the research group headed by Paul Harvey in the Department of Zoology at the University of Oxford. The Molecular Population Genetics of HIV-1 Group O Rise and fall of the Beringian steppe bison evolve.zoo.ox.ac.uk   (291 words)

Oxford Evolutionary Biology - Evolution, Molecular Phylogenetics & Epidemiology, Molecular Evolution Software This is a site for various projects in evolutionary biology, molecular evolution and phylogenetic epidemiology being carried out by members of the research group headed by Paul Harvey in the Department of Zoology at the University of Oxford. Bayesian Evolutionary Analysis Sampling Trees - a Bayesian MCMC for phylogenetic analyses of molecular sequences. Bayesian coalescent inference of past population dynamics from molecular sequences evolve.zps.ox.ac.uk /PhySoft/PhySoft.html   (291 words)

: Evolution, review at WorldSSP.net Biology Links: EvolutionGeneral Evolution Resources Journals Software Academic Departments and Laboratories Organizations Museums and Exhibits Collections Molecular Evolution Phylogenetics, Systematics, and Taxonomy OtherGeneral Evolution ResourcesJournalsAmerican Scientist Cladistics Call for Papers: Evolution, Learning and Instinct: 100 Years... Welcome to the Evolution WingThese exhibits trace evolutionary thought as it has developed over time, pausing to ponder the contributions of scientists and thinkers including Aristotle, Darwin, Wallace, and many others. Browse this journal Journal Information for Evolution Publisher: Society for the Study of Evolution Moving Wall: 3 ISSN: 00143820 OCLC: 45446897 LCCN: 00-227428 Pre- and post... www.worldssp.net /webinfo.asp?proid=12043   (438 words)

Systematics links The Tree of Life is used by those interested in locating information about a particular group of organisms, by biologists seeking identification keys, figures, phylogenetic trees, and other systematic information for a group of organisms, and by educators teaching about organismal diversity. A permanent home for biodiversity, systematics, phylogenetics, and bioinformatics research. Software for Systematics, including the tree-search parsimony-based programs NONA and TNT and the data management analysis and tree editing program WinClada. www.science.siu.edu /plant-biology/Faculty/nickrent/SystematicsLinks556.html   (2597 words)

Topic Index - Evolution Links are categorized by General Evolution Resources; General Biology Resources; Meetings; Journals; Books; Software; Academic Departments and Laboratories; Organizations; Museums and Exhibits; Collections; Molecular Evolution; Phylogenetics, Systematics, and Taxonomy; and Paleontology and Natural History. It features regular updates on evolutionary projects, commentary and opinions from leading writers and thinkers in the field, exclusive access to some great modern minds, pocket previews of major new ideas, and numerous links. This online magazine is a forum for presenting, discussing, and debating new, thought-provoking evolutionary ideas-in particular, those issues related to human evolution. www.mhhe.com /biosci/genbio/topicindex/evolution.html   (759 words)

Evolutionary Theory Internet resources on evolutionary biology, including meetings announcements, books / software, academic departments, laboratories, museums / exhibits / collections, phylogenetics, systematics, taxonomy, paleontology, and natural history. An international network discussion group for academic professionals in the historical sciences, including evolutionary biology, systematics, phylogeny, archaeology, paleoanthropology, etc. Welcomes serious academic discussion of any related field with special reference to history, theory, or interdisciplinary comparison. Course lecture notes for evolutionary developmental biology courtesy of the Centre for Human Biology. www.geocities.com /CapeCanaveral/Lab/9893/evolutionlinks.html   (216 words)

Oxford Evolutionary Biology - Evolution, Molecular Phylogenetics & Epidemiology, Molecular Evolution Software All email addresses on this web site are drawn using JavaScript. Page layout last updated 22 November 2005 by Andrew Rambaut This is a site for various projects in evolutionary biology, molecular evolution and phylogenetic epidemiology being carried out by members of the research group headed by Paul Harvey in the Department of Zoology at the University of Oxford. evolve.zoo.ox.ac.uk   (280 words)

Phylogenetics Software Neighbor Joining methods generally produce just one tree, which can help to validate a parsimony or maximum likelihood method if that tree is also present among the possible choices. PHYLIP, like GCG is a collection of many programs that perform specific functions including UPGMA, Neighbor Joining, Parsimony, and Maximum Likelihood algorithms as well as tools to manipulate DNA sequences, calculate distance matrixes, and draw tree figures. Bootstrapping methods such as recalculating with random sequences deleted from the sample set can give and indication of the robustness of a given conclusion. www.med.nyu.edu /rcr/rcr/course/phylo-software.html   (705 words)

Try your search on: Qwika (all wikis)

About us   |   Why use us?   |   Reviews   |   Press   |   Contact us   Copyright © 2005-2007 www.factbites.com Usage implies agreement with terms.