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Topic: Phylogeography

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	Phylogeography : The History and Formation of Species by John C. Avise
		Phylogeography, a textbook based on a combining of the empirical and conceptual fields of phylogenetic biology and population genetics, is not for everyone.
		Phylogeography is a field of study concerned with the principles and processes governing the geographic distributions of genealogical lineages.
		Phylogeography captures the conceptual and empirical richness of the field, and also the sense of genuine innovation that phylogeographic perspectives have brought to evolutionary studies.
	www.2think.org /phylogeography.shtml (856 words)

	Spartanburg SC \| GoUpstate.com \| Spartanburg Herald-Journal
		Phylogeography is the study of the processes controlling the geographic distributions of lineages by constructing the genealogies of populations and genes.
		Two developments during the 1960s and 1970s were particularly important in laying the groundwork for modern phylogeography; the first was the spread of cladistic thought, and the second was the development of plate tectonics theory.
		Phylogeography is a useful tool in understanding the origins and distributions of different viral strains.
	www.goupstate.com /apps/pbcs.dll/section?category=NEWS&template=wiki&text=phylogeography (1270 words)

	Harvard University Press/Phylogeography
		The word "phylogeography" was coined in 1987, and since then the scientific literature has reflected an exploding interest in the topic.
		The study of phylogeography grew out of the observation that mitochondrial DNA lineages in natural populations often display distinct geographic orientations.
		Phylogeography captures the conceptual and empirical richness of the field, and also the sense of genuine innovation that phylogeographic perspectives have brought to evolutionary studies.
	www.hup.harvard.edu /catalog/AVIPHY.html (267 words)

	American Zoologist: Phylogeography: The History and Formation of Species
		Phylogeography combines information from population genetics, phylogenetics, geoclimatic history, paleontology, population biology, molecular evolution, and historical biogeography in order to characterize the geographic distributions of genealogical lineages across the geographic landscape (referred to as phylogeographic patterns), and to infer the evolutionary, demographic and biogeographic processes that have shaped these patterns.
		Throughout Phylogeography: The History and Formation of Species there is a bias towards multicellular animals, as Avise acknowledges in the preface (this reflects a bias in existing empirical phylogeographic studies, rather than that of the author).
		Although researchers deeply entrenched in phylogeography are unlikely to find a great deal of novel material, they too should find the book quite valuable as a general reference or as a text for a course or seminar in phylogeography.
	www.findarticles.com /p/articles/mi_qa3746/is_200102/ai_n8947249 (1088 words)

	Simison Research Interests (Site not responding. Last check: 2007-10-18)
		The term phylogeography is currently being used to describe 2 different biogeographical levels; inter and intraspecific relationships.
		Population biologist use "phylogeography" to describe their study of population structure by looking at reticulating populations and their haplotype distributions and gene flow.
		I suggest that phylogeneticist retain the term phylogeography and that population biologist use the term "tokogeography".
	socrates.berkeley.edu /~simey/resinterests.html (404 words)

	Faculty Profile: Dr. John M. (Jack) Sullivan, Department of Biological Sciences, University of Idaho
		Analyses of mtDNA data indicate that there are strong similarities between the phylogeographies of the two complexes; in both complexes, populations from each of several mountain ranges represent monophyletic assemblages of haplotypes, and the Isthmus of Tehuantepec is a strong phylogeographic barrier.
		Phylogeography and introgressive hybridization: Chipmunks (Tamias) in the northern Rocky Mountains.
		Phylogeography of the tailed frog (Ascaphus truei): Implications for biogeography of the Pacific Northwest.
	www.sci.uidaho.edu /biosci/faculty/sullivan.html (1321 words)

	Minna Ruokonen. Phylogeography and conservation genetics of the lesser white-fronted goose (<em>Anser ...
		Phylogeography and conservation genetics of the lesser white-fronted goose (Anser erythropus).
		Phylogeography and conservation genetics of the lesser white-fronted goose (Anser erythropus)
		Analyses of mitochondrial control region sequences were used to infer phylogeny of Anser species, phylogeography of the lesser white-fronted goose, and genetic background of a captive stock.
	herkules.oulu.fi /isbn9514259483 (425 words)

	Harvard University Press/Phylogeography/Reviews (Site not responding. Last check: 2007-10-18)
		Phylogeography is an enjoyable and gap-filling synopsis that introduces an actively developing research area.
		John Avise coined the term 'phylogeography' in 1987 and has been the prime mover in promoting the successful development of the field ever since.
		It is therefore to be welcomed that he has written this book which reviews the history of phylogeography, the fundamental principles of the field and the current and future value of phylogeography within biogeography and evolutionary biologyÉI was very impressed by the manner in which Avise communicates the fundamentals of phylogeographic theory.
	www.hup.harvard.edu /reviews/AVIPHY_R.html (404 words)

	Phylogeography
		Recent approaches have taken a stronger statistical approach to phylogeography that was done initially.
		A comparative phylogenetic approach in the Australian Wet Tropics indicates that regional patterns of species distribution and diversity are largely determined by local extinctions and subsequent recolonizations corresponding to climatic cycles.
		Phylogeography has also proven to be useful in understanding the origin and dispersal patterns of our own species, Homo sapiens.
	www.dejavu.org /cgi-bin/get.cgi?ver=93&url=http%3A%2F%2Farticles.gourt.com%2F%3Farticle%3Dphylogeography%26type%3Den (1293 words)

	Population Genetics and Phylogeography of Walleye in the Great Lakes: (Site not responding. Last check: 2007-10-18)
		Population Genetics, systematics and phylogeography of walleye and the extinct blue pike form.
		Population genetics, phylogeography, and systematics of the thornyhead rockfishes (Sebastolobus) along the deep continental slopes of the North Pacific Ocean.
		Phylogeography of the spotted sandbass, Paralabrax maculatofasciatus: Divergence of Gulf of California and Pacific coast populations.
	bgesweb.artscipub.csuohio.edu /faculty/stepien/stepien_lab.htm (2476 words)

	Amazon.com: Phylogeography: The History and Formation of Species: Books: John C. Avise (Site not responding. Last check: 2007-10-18)
		John Avise coined the term 'phylogeography' in 1987 and has been the prime mover in promoting the successful development of the field ever since.
		It is therefore to be welcomed that he has written this book which reviews the history of phylogeography, the fundamental principles of the field and the current and future value of phylogeography within biogeography and evolutionary biology…I was very impressed by the manner in which Avise communicates the fundamentals of phylogeographic theory.
		This book is on the shelf of all (grad students like myself) who work with phylogeography for a reason: It is complete, and it the first book to grab when starting a project of the sort.
	www.amazon.com /Phylogeography-Formation-John-C-Avise/dp/0674666380 (1094 words)

	Auk, The: Phylogeography of the California thrasher (Toxostoma redivivum) based on nested-clade analysis of ...
		PHYLOGEOGRAPHY USES GEOGRAPHIC distributions and genealogical relationships to infer biogeographic and demographic history of an individual species or group of closely related taxa.
		Presented here is the phylogeography of the California Thrasher, based on nested-clade analysis of mtDNA data.
		Once we infer spatial and temporal organization of the inferred processes, our results are interpreted within the biogeographic context of (1) the geologic history of this region and (2) the phylogeographic patterns proposed for other codistributed taxa of similar age ("comparative phylogeography").
	www.findarticles.com /p/articles/mi_qa3793/is_200304/ai_n9166793 (1281 words)

	Phylogeography (Site not responding. Last check: 2007-10-18)
		Phylogeography is the study of patterns of genetic variation within, between, and among populations distributed across geographic space.
		In addition to the obvious implications of phylogeography for the field of evolutionary biology, it also has important practical applications to conservation biology.
		In particular, the analysis of DNA sequences that is becoming an integral tool in phylogeography can help to identify evolutionarily significant units (ESUs).
	www.louisville.edu /~jrmcca02/phylogeography.htm (602 words)

	Pritzker Laboratory - Graduate Students
		Phylogeography of the endemic Philippine fruit bat Haplonycteris fischeri.
		Comparative phylogeography of the fruit bats Cynopterus brachyotis and Haplonycteris fischeri in the Philippines.
		Comparative phylogeography of the endemic Philippine fruit bats Ptenochirus jagori and Ptenochirus minor.
	www.fieldmuseum.org /research_collections/pritzker_lab/pritzker/people/grad_roberts.html (365 words)

	Intraspecific phylogeography - Wildlife Genetics Primer - Canadian Wildlife Service - Environment Canada
		Many of the preceding genetic applications focus on the distribution of genetic diversity within and among populations and derive from the field of population genetics.
		Comparative phylogeography requires an examination of the geographic and temporal distribution of evolutionary lineages of unrelated taxa that share similar geographic ranges (Avise 2000).
		Regions that contain geographically circumscribed ESUs for a range of taxa (distinct from other such regions) may be considered phylogeographic "hotspots." Avise (1996) raises the prospect of biogeographic reserves that conserve distinct phyogeographic populations segments across a range of species.
	www.cws-scf.ec.gc.ca /birds/gene/phylo_e.cfm (1199 words)

	Founding father: Casual conversations help lead NAS member to found and develop phylogeography, a new field of ...
		His book, Phylogeography: The History and Formation of Species, is about the geographical distribution of genealogical lineages and was just published by Harvard University Press.
		Journal articles using the term began to appear in the late 1980s, and within a decade use of the term was rising geometrically, as one scientist after another around the world began to realize the usefulness and power of Avise’s concepts.
		“Phylogeography is an integrative endeavor that lies at the important crossroads of diverse evolutionary disciplines,” says Avise.
	www.uga.edu /columns/000131/campnews.html (821 words)

	CiteULike: Population genetics and phylogeography of endangered Oxytropis campestris var. chartacea and relatives: ... (Site not responding. Last check: 2007-10-18)
		CiteULike: Population genetics and phylogeography of endangered Oxytropis campestris var.
		Population genetics and phylogeography of endangered Oxytropis campestris var.
		@article{citeulike:23480, author = {Chung, Melissa H. and Gelembiuk, G. and Givnish, Thomas I. citeulike-article-id = {23480}, doi = {10.1111/j.1365-294X.2004.02360.x}, issn = {0962-1083}, journal = {Molecular Ecology}, number = {12}, pages = {3657+}, publisher = {Blackwell Publishing}, title = {Population genetics and phylogeography of endangered Oxytropis campestris var.
	www.citeulike.org /article/23480 (135 words)

	Intraspecific Phylogeography of the Rosy Boa (Site not responding. Last check: 2007-10-18)
		Threats from various factors have raised concern regarding the long-term survival of many populations, particularly within southern California (a region where populations are highly fragmented).
		This study examines the phylogeography, population structure, and taxonomy of the Rosy boa across its geographic range through phylogenetic analysis of ~ 1100 bp of mitochondrial DNA sequence data.
		Wood, D.A. Intraspecific Phylogeny of the Rosy Boa (Charina Trivirgata): Implications for Phylogeography, Taxonomy, and Conservation.
	www.werc.usgs.gov /sandiego/rosy-boa.html (343 words)

	EVOLUTION: ON PHYLOGEOGRAPHY
		1) Phylogeography [1] is a young and fast-growing field that analyses the geographical distribution of genealogical lineages.
		It grew out of the new techniques of the 1980s that made it possible to determine DNA sequence variation from individuals across a species range, and hence to reconstruct gene genealogies.
		Today, a range of DNA techniques, combined with new analytical methods and recent palaeoclimatic and geological studies are providing important insight into the distribution of genetic diversity around the globe, and how it evolved.
	scienceweek.com /2005/sw050624-4.htm (1621 words)

	Theses from Uppsala University : 3477 - Phylogeography of the Adder, Vipera berus
		The phylogeography of a wide ranging temperate species, the adder, Vipera berus, was investigated using several genetic tools, with special emphasis on the post-glacial colonisation pattern of Fennoscandia.
		Carlsson, Martin ; Tegelström, Håkan: The phylogeography of adders (Vipera berus) from Fennoscandia.
		Ursenbacher, Sylvain ; Carlsson, Martin ; Helfer, Veronique ; Tegelström, Håkan ; Fumagalli, Luca: Phylogeography and Pleistocene refugiaof the Adder (Vipera berus) as inferred from mitochondrial DNA sequence data (Manuscript)
	publications.uu.se /theses/abstract.xsql?isbn=91-554-5656-1 (487 words)

	Reconciling paleodistribution models and comparative phylogeography in the Wet Tropics rainforest land snail ...
		Reconciling paleodistribution models and comparative phylogeography in the Wet Tropics rainforest land snail Gnarosophia bellendenkerensis (Brazier 1875) -- Hugall et al.
		Reconciling paleodistribution models and comparative phylogeography in the Wet Tropics rainforest land snail Gnarosophia bellendenkerensis (Brazier 1875)
		Comparative phylogeography has proved useful for investigating biological responses to past climate change and is strongest
	www.pnas.org /cgi/content/short/99/9/6112 (370 words)

	BioMed Central \| Full text \| Phylogeography of competing sexual and parthenogenetic forms of a freshwater flatworm: ...
		Phylogeography of competing sexual and parthenogenetic forms of a freshwater flatworm: patterns and explanations
		Hewitt [44] analysed the effects of recurrent ice ages and concluded that species ranges have contracted and expanded repeatedly.
		Taberlet P, Fumagalli L, Wust-Saucy AG, Cossons JF: Comparative phylogeography and postglacial colonization routes in Europe.
	www.biomedcentral.com /1471-2148/3/23 (5422 words)

	Worldwide Phylogeography of Wild Boar Reveals Multiple Centers of Pig Domestication -- Larson et al. 307 (5715): 1618 ...
		Worldwide Phylogeography of Wild Boar Reveals Multiple Centers of Pig Domestication -- Larson et al.
		Worldwide Phylogeography of Wild Boar Reveals Multiple Centers of Pig Domestication
		From the Cover: Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa.
	www.sciencemag.org /cgi/content/abstract/307/5715/1618 (758 words)

	Prochilodus phylogeography
		When mtDNA substitution rates are homogeneous across lineages and time, the chronology of vicariant events and diversification also may be estimated from genetic distance data and compared to known dates of geological events (Bermingham and Avise 1986; Page 1991, 1996).
		Avise JC, Arnold J, Ball RM, Bermingham E, Lamb T, Neigel JE, Reeb CA, Saunders NC (1987) Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics.
		Bermingham E, Martin AP (1998) Comparative mtDNA phylogeography of neotropical freshwater fishes: testing shared history to infer the evolutionary landscape of lower Central America.
	golab.unl.edu /publications/Sivasundar2001/Sivasundar2001.html (6420 words)

	IngentaConnect Phylogeography of the genus Xenopus in southern Africa (Site not responding. Last check: 2007-10-18)
		IngentaConnect Phylogeography of the genus Xenopus in southern Africa
		Phylogeography of the genus Xenopus in southern Africa
		You will be able to remove this item from your shopping cart at any time before you have completed check-out.
	www.ingentaconnect.com /content/brill/amre/2003/00000024/00000003/art00006 (187 words)

	2151*Walker, D., W.S. Nelson, K.A. Buhlmann, and J.C. Avise. 1997. Mitochondrial DNA phylogeography and subspecies ...
		Mitochondrial DNA phylogeography and subspecies issues in the monotypic freshwater turtle (Sternotnerus odoratus).
		Mitochondrial DNA Phylogeography and Subspecies Issues in the Monotypic Freshwater Turtle Sternotherus odoratus
		Stinkpots display pronounced and hierarchical mtDNA phylogeographic differentiation, ranging from genetically shallow differences among local populations to genetically deep distinctions among regional assemblages of haplotypes.
	www.uga.edu /srel/Reprint/2151.htm (186 words)

	Marine Phylogeography Seminar - F05 - Prof. Eernisse (Site not responding. Last check: 2007-10-18)
		For an explanation of what phylogeography is about read one or more of these pdfs:
		Comparative phylogeography as an integrative approach to historical biogeography.
		Avise, J. The history and purview of phylogeography: a personal reflection.
	biology.fullerton.edu /baja (69 words)

	Rare Deep-Rooting Y Chromosome Lineages in Humans: Lessons for Phylogeography -- Weale et al. 165 (1): 229 -- Genetics
		Rare Deep-Rooting Y Chromosome Lineages in Humans: Lessons for Phylogeography -- Weale et al.
		presented by rare deep-rooting lineages for Y chromosome phylogeography.
		, 2001 The phylogeography of Y chromosome binary haplotypes and the origins of modern human populations.
	www.genetics.org /cgi/content/full/165/1/229 (2917 words)

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