| |
| | Bayesian Phylogenetic Analysis |
 | | These are clade-credibility values, and are in fact the posterior probability that the clade is real (based on the present data set). |
 | | Secondly, the posterior probability distribution of each parameter is summarized by giving the mean, variance, median, and 95% credible interval. |
 | | If the prior probability distribution is flat (i.e., if all possible parameter values have the same prior probability) then the posterior distribution is simply proportional to the likelihood distribution, and the parameter value with the maximum likelihood then also has the maximum posterior probability. |
| www.cbs.dtu.dk /courses/PR/bayes.php (3911 words) |
|